30. Functional Analysis of All Salmonid Genomes (FAASG): an international initiative supporting future salmonid research, conservation and aquaculture.

Macqueen DJ, Primmer, C, Houston R, Nowak B, Bernatchez L, Bergseth S, Davidson WS, Gallardo-Escárate C, Goldammer T, Guiguen Y, Iturra P, Kijas JW, Koop B, Lien S, Maass A, Martin S, McGinnity P, Montecino M, Naish K, Nichols K, Ólafsson K, Omholt S, Palti Y, Plastow G, Rexroad 3rd C, Rise M, Ritchie R, Sandve SR, Schulte P, Tello A, Vidal R, Vik JO, Wargelius A, Yáñez JM.

BMC Genomics 18: 484

29. Resistance against infectious pancreatic necrosis exhibits significant genetic variation and is not genetically correlated with harvest weight in rainbow trout (Oncorhynchus mykiss).

Flores-Mara R, Rodríguez FH, Bangera R, Lhorente JP, Neira R, Newman S, Yáñez JM.

Aquaculture 479: 155-160

28. Mate selection in aquaculture breeding using differential evolution algorithm.

Yoshida GM, Yáñez JM, Lopes de Oliveira CA, Ribeiro RP, Lhorente JP, Aidar de Queiroz S, Carvalheiro R.

Aquaculture Research 48: 5490–5497

27. The use of genomic information increases the reliability of breeding value predictions for sea louse (Caligus rogercresseyi) resistance in Atlantic salmon (Salmo salar).

Correa K, Bangera R, Lhorente JP, Yáñez JM.

Genetics Selection Evolution 49: 15

25. Genomic predictions can accelerate selection for resistance against Piscirickettsia salmonis Atlantic salmon (Salmo salar).

Bangera R, Correa K, Lhorente JP, Figueroa R, Yáñez JM.

BMC Genomics 18: 121

24. Genome wide association study for resistance to Caligus rogercresseyi in Atlantic salmon (Salmo salar L. ) using a 50K SNP genotyping array.

Correa K, Lhorente JP, Bassini L, López ME, Di Génova A, Maass A, Davidson WS, Yáñez JM.

Aquaculture 472-S1: 61-65

23. Correlated response of flesh color to selection for harvest weight in coho salmon (Oncorhynchus kisutch).

Dufflocq P, Lhorente JP, Bangera R, Neira R, Newman S, Yáñez JM.

Aquaculture 472-S1: 38-43

21. Negative genetic correlation between harvest weight and resistance against Piscirickettsia salmonis in coho salmon (Oncorhynchus kisutch).

Yáñez JM, Bangera R, Lhorente JP, Barría A, Oyarzún M, Neira R, Newman S.

Aquaculture 459: 8-13

20. Genome wide single nucleotide polymorphism (SNP) discovery in Atlantic salmon (Salmo salar): validation in farmed and wild American and European populations.

Yáñez JM, , Naswa S, López ME, Bassini L, Correa K, Gilbey J, Bernatchez L, Norris A, Neira R, Lhorente JP, Schnable P, Newman N, Mileham A, Deeb N, Di Genova A, Maass A.

Molecular Ecology Resources 16: 1002-1011

19. Evidence of recent signatures of selection during domestication in an Atlantic salmon population.

Gutierrez AP, Yáñez JM, Davidson WS.

Marine Genomics 26: 41-50

18. Characterization of antimicrobial susceptibility and its association to virulence genes related with adherence, invasion and citotoxicity in Campylobacter jejuni and Campylobacter coli isolates from animals, meat and humans.

Lapierre L, Gatica MA, Riquelme V, Vergara C, Yáñez JM, San Martín B, Sáenz L, Vidal M, Martínez MC, Araya P, Flores R.

Microbial Drug Resistance 22: 432-444

17. Evaluation of the growth and carcass quality of diallel crosses of four strains of Nile tilapia (Oerochromis niloticus).

Neira R, García X, Lhorente JP, Filp M, Yáñez JM, Cascante AM.

Aquaculture 451: 213-222

15. High-throughput transcriptome analysis of ISAV-infected Atlantic salmon Salmo salar unravels divergent immune responses associated to head-kidney, liver and gills tissues.

Valenzuela-Miranda D, Cabrejos ME, Cisterna D, Yáñez JM, Gallardo-Escárate C.

Fish and Shellfish Immunology 45: 367-377

14. Genomics in aquaculture to better understand species biology and accelerate genetic progress.

Yáñez JM, Houston R, Newman S.

Frontiers in Genetics 6: 128

13. Genome-wide association study (GWAS) for growth rate and sexual maturation in Atlantic salmon (Salmo salar).

Gutierrez AP, Yáñez JM, Fukui S, Swift B, Davidson WS.

PLOS One 10: e0119730

12. Applications in the search for genomic selection signatures in fish.

López ME, Neira R, Yáñez JM.

Frontiers in Genetics 5: 458

11. From the viral perspective: Infectious salmon anemia virus (ISAV) transcriptome during the infective process in Atlantic salmon (Salmo salar).

Valenzuela-Miranda D, Cabrejos ME, Yáñez JM, Gallardo-Escárate C.

Marine Genomics 20: 39-43

9. Effect of triploidy in the expression of immune-related genes in coho salmon (Oncorhynchus kisutch Walbaum) infected with Piscirickettsia salmonis.

Correa K, Filp M, Cisterna D, Cabrejos ME, Gallardo-Escárate C, Yáñez JM.

Aquaculture Research 46: 59-63

8. Genetic co-variation between resistance against both Caligus rogercresseyi and Piscirickettsia salmonis, and body weight in Atlantic salmon (Salmo salar).

Yáñez JM, Lhorente JP, Bassini LN, Oyarzún M, Neira R, Newman S.

Aquaculture 433:295-298

7. Inbreeding and effective population size in a coho salmon (Oncorhynchus kisutch) breeding nucleus in Chile.

Yáñez JM, Bassini LN, Lhorente JP, Filp M, Ponzoni R, Neira R.

Aquaculture 420-421:S15-S19

5. Characterization of Mycobacterium salmoniphilum as causal agent of mycobacteriosis in Atlantic salmon, Salmo salar L., from a freshwater recirculation system.

Aro L, Correa K, Martínez A, Ildefonso R, Yáñez JM.

Journal of Fish Diseases 37: 341-348

4. Assessing footprints of selection in commercial Atlantic salmon populations using microsatellite data.

Martinez V, Detleff P, López P, Fernández G, Jedlicki A, Yáñez JM, Davidson WS.

Animal Genetics 44: 233-236

2. Characterization of new microsatellite markers derived from sequence databases for the emu (Dromaius novaehollandiae).

Yáñez JM, González R, Angulo J, Vidal R, Santos JL, Martínez V.

Molecular Ecology Resources 8: 1442-1444

1. The CK1 gene family: expression patterning in zebrafish development.

Albornoz A*, Yáñez JM*, Foerster C, Aguirre C, Pereiro L, Burzio V, Moraga M, Reyes AE, Antonelli M.

Biological Research 40: 251-266

*Both authors contributed equally to this work